RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g42160.1 View Network Show in Genome Browser |
| Other Names | Os11g0641200 |
| Description | F-box/LRR-repeat protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 25382754-25385184 Nucleotide Length: 1845 |
| Protein-coding | LOC_Os11g42160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g26910 LOC_Os01g27160 LOC_Os02g47870 LOC_Os09g36830 LOC_Os03g02680 LOC_Os01g27150 LOC_Os01g09460 LOC_Os05g05700 LOC_Os05g51550 LOC_Os03g16110 LOC_Os08g20270 More.. |
| Downstream Genes | LOC_Os12g10560 LOC_Os12g07720 LOC_Os12g42850 LOC_Os12g37590 LOC_Os12g07820 LOC_Os12g07830 LOC_Os12g02830 LOC_Os12g37630 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g42160.1 |
| Rice Genome Annotation | LOC_Os11g42160.1 |
| Ricechip | LOC_Os11g42160.1 |
| KEGG | osa:4351003 dosa:Os11t0641200-01 |
| Entrez-Gene | 4351003 |