RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g42220.1 View Network Show in Genome Browser |
| Other Names | Os11g0641800 |
| Description | laccase precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 25426396-25429313 Nucleotide Length: 1743 |
| Protein-coding | LOC_Os11g42220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28620 LOC_Os04g28520 LOC_Os04g46130 LOC_Os08g16260 LOC_Os02g57120 LOC_Os03g45619 LOC_Os05g11990 LOC_Os02g20560 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR437 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g42220.1 |
| Rice Genome Annotation | LOC_Os11g42220.1 |
| Ricechip | LOC_Os11g42220.1 |
| KEGG | osa:4351006 dosa:Os11t0641800-01 |
| Entrez-Gene | 4351006 |