RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g42350.1 View Network Show in Genome Browser |
| Other Names | Os11g0642800 |
| Description | glutathione synthetase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 25491197-25491619 Nucleotide Length: 1638 |
| Protein-coding | LOC_Os11g42350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25100 LOC_Os10g38660 LOC_Os03g50130 LOC_Os10g38670 LOC_Os01g27210 LOC_Os10g38489 LOC_Os10g38160 LOC_Os10g38470 LOC_Os10g38360 LOC_Os10g38580 LOC_Os10g38340 More.. |
| Downstream Genes | LOC_Os12g02960 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn01100 |
| Metacyc Pathways | GLUTATHIONESYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g42350.1 |
| Rice Genome Annotation | LOC_Os11g42350.1 |
| Ricechip | LOC_Os11g42350.1 |
| KEGG | osa:4351008 dosa:Os11t0642800-01 |
| Entrez-Gene | 4351008 |