RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g43620.2 View Network Show in Genome Browser |
| Other Names | Os11g0657300 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 26313077-26315155 Nucleotide Length: 258 |
| Protein-coding | LOC_Os11g43620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g05530 LOC_Os02g03440 LOC_Os05g24970 LOC_Os04g39444 LOC_Os02g01250 LOC_Os03g13760 LOC_Os02g37430 LOC_Os02g01740 LOC_Os05g32310 LOC_Os03g59710 LOC_Os03g53220 More.. |
| Downstream Genes | LOC_Os12g18880 LOC_Os12g42140 LOC_Os12g44390 LOC_Os12g37370 LOC_Os12g19590 LOC_Os11g45590 LOC_Os12g03710 LOC_Os12g04180 LOC_Os11g48030 LOC_Os12g09280 LOC_Os12g38310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g43620.2 |
| Rice Genome Annotation | LOC_Os11g43620.2 |
| Ricechip | LOC_Os11g43620.2 |
| KEGG | osa:4351052 dosa:Os11t0657300-01 |
| Entrez-Gene | 4351052 |