RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g43750.1 View Network Show in Genome Browser |
| Other Names | Os11g0658800 |
| Description | polygalacturonase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 26414394-26418442 Nucleotide Length: 1350 |
| Protein-coding | LOC_Os11g43750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44630 LOC_Os09g36520 LOC_Os06g05550 LOC_Os04g38570 LOC_Os03g50810 LOC_Os04g57800 LOC_Os08g39490 LOC_Os02g55120 LOC_Os06g06520 LOC_Os03g32790 |
| Downstream Genes | LOC_Os11g44810 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g43750.1 |
| Rice Genome Annotation | LOC_Os11g43750.1 |
| Ricechip | LOC_Os11g43750.1 |
| KEGG | osa:4351055 dosa:Os11t0658800-01 |
| Entrez-Gene | 4351055 |