RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g43900.2 View Network Show in Genome Browser |
| Other Names | Os11g0660500 |
| Description | translationally-controlled tumor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 26510871-26513134 Nucleotide Length: 393 |
| Protein-coding | LOC_Os11g43900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g29190 LOC_Os04g28180 LOC_Os02g21660 LOC_Os01g64090 LOC_Os01g54870 LOC_Os03g10340 LOC_Os02g28810 LOC_Os04g50990 LOC_Os08g44380 LOC_Os05g49030 LOC_Os01g47660 More.. |
| Downstream Genes | LOC_Os12g21798 LOC_Os12g38000 LOC_Os12g42876 LOC_Os12g42884 LOC_Os12g03880 LOC_Os11g47760 LOC_Os12g07010 LOC_Os12g35570 LOC_Os12g37650 LOC_Os12g03090 LOC_Os12g01520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g43900.2 |
| Rice Genome Annotation | LOC_Os11g43900.2 |
| Ricechip | LOC_Os11g43900.2 |
| KEGG | osa:4351061 dosa:Os11t0660500-01 |
| Entrez-Gene | 4351061 |