RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g45540.1 View Network Show in Genome Browser |
| Other Names | Os11g0681400 |
| Description | TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 27563288-27567463 Nucleotide Length: 1878 |
| Protein-coding | LOC_Os11g45540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os02g55560 LOC_Os02g15594 LOC_Os04g56450 LOC_Os06g44210 LOC_Os04g37904 LOC_Os04g31270 LOC_Os04g52000 More.. |
| Downstream Genes | LOC_Os12g33100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR169b osa-miR169c |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g45540.1 |
| Rice Genome Annotation | LOC_Os11g45540.1 |
| Ricechip | LOC_Os11g45540.1 |
| KEGG | osa:4351122 dosa:Os11t0681400-00 |
| Entrez-Gene | 4351122 |