RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g45780.1 View Network Show in Genome Browser |
| Other Names | |
| Description | RGH2B, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 27694881-27695746 Nucleotide Length: 735 |
| Protein-coding | LOC_Os11g45780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35630 LOC_Os02g19150 LOC_Os01g66330 LOC_Os05g45750 LOC_Os04g44400 LOC_Os02g42290 LOC_Os03g22430 LOC_Os03g29810 LOC_Os01g16530 LOC_Os01g32350 LOC_Os06g20320 More.. |
| Downstream Genes | LOC_Os12g10590 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118b osa-miR2118n |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g45780.1 |
| Rice Genome Annotation | LOC_Os11g45780.1 |
| Ricechip | LOC_Os11g45780.1 |