RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g46240.1 View Network Show in Genome Browser |
| Other Names | Os11g0689400 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 27998365-28005151 Nucleotide Length: 4197 |
| Protein-coding | LOC_Os11g46240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27930 LOC_Os02g31140 LOC_Os01g68760 LOC_Os01g25330 LOC_Os10g34380 LOC_Os01g34780 LOC_Os06g19470 LOC_Os09g03610 LOC_Os03g56700 |
| Downstream Genes | LOC_Os12g10200 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR169r-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g46240.1 |
| Rice Genome Annotation | LOC_Os11g46240.1 |
| Ricechip | LOC_Os11g46240.1 |
| KEGG | osa:4351155 dosa:Os11t0689400-00 |
| Entrez-Gene | 4351155 |