RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g47130.1 View Network Show in Genome Browser |
| Other Names | Os11g0693900 |
| Description | protein transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 28335093-28338717 Nucleotide Length: 3132 |
| Protein-coding | LOC_Os11g47130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g49260 LOC_Os06g16280 LOC_Os03g42050 LOC_Os04g59494 LOC_Os03g15540 |
| Downstream Genes | LOC_Os11g47320 LOC_Os12g38110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396a-3p osa-miR396b-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g47130.1 |
| Rice Genome Annotation | LOC_Os11g47130.1 |
| Ricechip | LOC_Os11g47130.1 |
| KEGG | osa:4351168 dosa:Os11t0693900-01 |
| Entrez-Gene | 4351168 |