RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g47800.1 View Network Show in Genome Browser |
| Other Names | Os11g0704300 |
| Description | spo0B-associated GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 28820765-28824245 Nucleotide Length: 1587 |
| Protein-coding | LOC_Os11g47800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g31228 LOC_Os08g31219 LOC_Os04g25540 LOC_Os01g69950 LOC_Os02g15900 LOC_Os05g48410 LOC_Os01g27730 LOC_Os01g55890 LOC_Os11g38020 LOC_Os03g22890 LOC_Os05g35540 More.. |
| Downstream Genes | LOC_Os12g42370 LOC_Os12g09570 LOC_Os12g17320 LOC_Os12g13824 LOC_Os12g42870 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g47800.1 |
| Rice Genome Annotation | LOC_Os11g47800.1 |
| Ricechip | LOC_Os11g47800.1 |
| KEGG | osa:4351211 dosa:Os11t0704300-01 |
| Entrez-Gene | 4351211 |