RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g47830.1 View Network Show in Genome Browser |
| Other Names | Os11g0704700 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 28845905-28852938 Nucleotide Length: 1509 |
| Protein-coding | LOC_Os11g47830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g39180 LOC_Os01g72834 LOC_Os03g25960 LOC_Os02g12850 LOC_Os07g43810 LOC_Os08g40880 LOC_Os06g37000 LOC_Os08g09350 LOC_Os07g41120 LOC_Os07g42380 LOC_Os04g31620 More.. |
| Downstream Genes | LOC_Os12g43600 LOC_Os12g04180 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g47830.1 |
| Rice Genome Annotation | LOC_Os11g47830.1 |
| Ricechip | LOC_Os11g47830.1 |
| KEGG | osa:4351215 dosa:Os11t0704700-01 |
| Entrez-Gene | 4351215 |