RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g48020.1 View Network Show in Genome Browser |
| Other Names | Os11g0707600 |
| Description | fatty acid hydroxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 28953907-28957199 Nucleotide Length: 801 |
| Protein-coding | LOC_Os11g48020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g29170 LOC_Os03g56820 LOC_Os02g49590 LOC_Os03g12900 LOC_Os05g45310 LOC_Os07g10600 LOC_Os02g02750 LOC_Os05g38360 LOC_Os04g51820 LOC_Os02g07830 LOC_Os03g12910 More.. |
| Downstream Genes | LOC_Os12g42230 LOC_Os12g43363 LOC_Os12g09540 LOC_Os12g43670 LOC_Os12g13380 LOC_Os12g02980 LOC_Os12g25710 LOC_Os12g39360 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY66-3 PWY66-341 PWY66-4 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g48020.1 |
| Rice Genome Annotation | LOC_Os11g48020.1 |
| Ricechip | LOC_Os11g48020.1 |
| KEGG | osa:4351226 dosa:Os11t0707600-01 |
| Entrez-Gene | 4351226 |