RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g48030.1 View Network Show in Genome Browser |
| Other Names | Os11g0707700 |
| Description | skp1 family, tetramerisation domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 28957900-28961097 Nucleotide Length: 375 |
| Protein-coding | LOC_Os11g48030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g26910 LOC_Os01g34614 LOC_Os02g42320 LOC_Os03g26970 LOC_Os07g49150 LOC_Os11g40140 LOC_Os03g18690 LOC_Os06g48640 LOC_Os09g33986 LOC_Os09g15750 LOC_Os02g47870 More.. |
| Downstream Genes | LOC_Os12g37370 LOC_Os12g30020 LOC_Os12g19590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g48030.1 |
| Rice Genome Annotation | LOC_Os11g48030.1 |
| Ricechip | LOC_Os11g48030.1 |
| KEGG | osa:4351227 dosa:Os11t0707700-01 |
| Entrez-Gene | 4351227 |