RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01060.1 View Network Show in Genome Browser |
| Other Names | Os12g0101000 |
| Description | RNase P subunit p30, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 35977-39954 Nucleotide Length: 2193 |
| Protein-coding | LOC_Os12g01060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g45250 LOC_Os03g29470 LOC_Os11g01074 LOC_Os07g22950 LOC_Os02g49360 LOC_Os05g39530 LOC_Os04g52850 LOC_Os03g08440 LOC_Os02g24612 LOC_Os07g42450 LOC_Os06g19680 More.. |
| Downstream Genes | LOC_Os12g01080 LOC_Os12g31380 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5161 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01060.1 |
| Rice Genome Annotation | LOC_Os12g01060.1 |
| Ricechip | LOC_Os12g01060.1 |
| KEGG | osa:9271052 dosa:Os12t0101000-01 |
| Entrez-Gene | 9271052 |