RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01140.5 View Network Show in Genome Browser |
| Other Names | Os12g0101800 |
| Description | AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 82408-89965 Nucleotide Length: 1650 |
| Protein-coding | LOC_Os12g01140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g01140 LOC_Os07g36800 LOC_Os02g55560 LOC_Os07g32380 LOC_Os05g31140 LOC_Os06g33549 LOC_Os03g18150 LOC_Os10g39540 LOC_Os04g37904 |
| Downstream Genes | LOC_Os12g41710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01140.5 |
| Rice Genome Annotation | LOC_Os12g01140.5 |
| Ricechip | LOC_Os12g01140.5 |
| KEGG | osa:4351240 dosa:Os12t0101800-02 |
| Entrez-Gene | 4351240 |