RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01160.1 View Network Show in Genome Browser |
| Other Names | Os12g0102100 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 93091-95423 Nucleotide Length: 1104 |
| Protein-coding | LOC_Os12g01160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01190 LOC_Os10g29470 LOC_Os09g23540 LOC_Os08g43190 LOC_Os08g01760 LOC_Os10g07229 LOC_Os03g08999 LOC_Os02g09490 LOC_Os11g01154 LOC_Os01g12800 LOC_Os02g42520 More.. |
| Downstream Genes | LOC_Os12g43740 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 LOC_Os12g12514 LOC_Os12g07810 LOC_Os12g07110 LOC_Os12g43664 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00062 rn01100 rn01040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01160.1 |
| Rice Genome Annotation | LOC_Os12g01160.1 |
| Ricechip | LOC_Os12g01160.1 |
| KEGG | osa:4351241 dosa:Os12t0102100-01 |
| Entrez-Gene | 4351241 |