RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01170.1 View Network Show in Genome Browser |
| Other Names | Os12g0102200 |
| Description | FGFR1 oncogene partner, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 96642-100000 Nucleotide Length: 780 |
| Protein-coding | LOC_Os12g01170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g01170 LOC_Os05g41930 LOC_Os06g38940 LOC_Os05g06760 LOC_Os02g35070 LOC_Os07g22220 LOC_Os03g13220 LOC_Os06g44030 LOC_Os08g07760 LOC_Os08g22354 LOC_Os03g52780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01170.1 |
| Rice Genome Annotation | LOC_Os12g01170.1 |
| Ricechip | LOC_Os12g01170.1 |
| KEGG | osa:4351242 dosa:Os12t0102200-01 |
| Entrez-Gene | 4351242 |