RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01180.1 View Network Show in Genome Browser |
| Other Names | Os12g0102300,Os12g0102350 |
| Description | WRKY57, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 100799-104008 Nucleotide Length: 1371 |
| Protein-coding | LOC_Os12g01180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g01180 LOC_Os01g25370 LOC_Os03g22400 LOC_Os03g29630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1857-5p |
| Reference | |
|---|---|
| PubMed | 15618416 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01180.1 |
| Rice Genome Annotation | LOC_Os12g01180.1 |
| Ricechip | LOC_Os12g01180.1 |
| KEGG | osa:4351243 dosa:Os12t0102300-01dosa:Os12t0102350-01 |
| Entrez-Gene | 4351243 |