RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01260.1 View Network Show in Genome Browser |
| Other Names | Os12g0103300 |
| Description | protein transport protein Sec61 subunit beta, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 156368-157071 Nucleotide Length: 324 |
| Protein-coding | LOC_Os12g01260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74170 LOC_Os04g24180 LOC_Os04g10240 LOC_Os06g44374 LOC_Os06g46000 LOC_Os02g08180 LOC_Os01g17190 LOC_Os07g39400 LOC_Os03g21540 LOC_Os05g39670 LOC_Os01g37030 More.. |
| Downstream Genes | LOC_Os12g32950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01260.1 |
| Rice Genome Annotation | LOC_Os12g01260.1 |
| Ricechip | LOC_Os12g01260.1 |
| KEGG | osa:9269540 dosa:Os12t0103300-01 |
| Entrez-Gene | 9269540 |