RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os12g01390.1 View Network Show in Genome Browser
Other Names	Os12g0104800,Os12g0104766
Description	clathrin heavy chain, putative, expressed
Gene Attributes	Chromosome: Chr12 CDS Coordinates (5'-3'): 249725-259877 Nucleotide Length: 5127
Protein-coding	LOC_Os12g01390

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g55860 LOC_Os11g01380 LOC_Os06g07090 LOC_Os04g11880 LOC_Os04g31390 LOC_Os07g08729 LOC_Os11g02110 LOC_Os03g23950 LOC_Os01g12880 LOC_Os09g25314 LOC_Os05g48930 More..
Downstream Genes	LOC_Os12g02070 LOC_Os12g22760 LOC_Os12g10560 LOC_Os12g39340 LOC_Os12g12860 LOC_Os12g43550 LOC_Os12g44250 LOC_Os12g43600 LOC_Os12g35570 LOC_Os12g24250 LOC_Os12g31800 More..

Database Links
Gramene	LOC_Os12g01390.1
Rice Genome Annotation	LOC_Os12g01390.1
Ricechip	LOC_Os12g01390.1
KEGG	osa:4351255 dosa:Os12t0104800-01 dosa:Os12t0104766-00
Entrez-Gene	4351255