RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01480.1 View Network Show in Genome Browser |
| Other Names | Os12g0105500 |
| Description | phosphatidate cytidylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 289600-291513 Nucleotide Length: 816 |
| Protein-coding | LOC_Os12g01480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g01450 LOC_Os02g01010 LOC_Os07g29240 LOC_Os04g52960 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN2-PWY PHOSLIPSYN-PWY PWY-5269 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01480.1 |
| Rice Genome Annotation | LOC_Os12g01480.1 |
| Ricechip | LOC_Os12g01480.1 |
| KEGG | osa:4351259 dosa:Os12t0105500-01 |
| Entrez-Gene | 4351259 |