RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01560.1 View Network Show in Genome Browser |
| Other Names | Os12g0106300 |
| Description | PMR5, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 337846-341468 Nucleotide Length: 1509 |
| Protein-coding | LOC_Os12g01560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g01570 LOC_Os05g03174 LOC_Os11g26190 LOC_Os05g01810 LOC_Os05g04820 LOC_Os06g44620 LOC_Os07g10770 LOC_Os05g06720 LOC_Os01g47780 LOC_Os02g41780 LOC_Os05g32500 More.. |
| Downstream Genes | LOC_Os12g32620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR418 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01560.1 |
| Rice Genome Annotation | LOC_Os12g01560.1 |
| Ricechip | LOC_Os12g01560.1 |
| KEGG | osa:4351267 dosa:Os12t0106300-01 |
| Entrez-Gene | 4351267 |