RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01580.2 View Network Show in Genome Browser |
| Other Names | Os12g0106600 |
| Description | MATE efflux protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 350767-355106 Nucleotide Length: 1020 |
| Protein-coding | LOC_Os12g01580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g03240 LOC_Os08g43654 LOC_Os07g31884 LOC_Os06g36330 LOC_Os03g64150 LOC_Os03g62270 LOC_Os03g37490 LOC_Os03g12790 LOC_Os03g08900 LOC_Os02g45380 LOC_Os01g49120 More.. |
| Downstream Genes | LOC_Os12g42130 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01580.2 |
| Rice Genome Annotation | LOC_Os12g01580.2 |
| Ricechip | LOC_Os12g01580.2 |
| KEGG | osa:4351269 dosa:Os12t0106600-01 |
| Entrez-Gene | 4351269 |