RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os12g01710.1 View Network Show in Genome Browser |
Other Names | Os12g0107866,Os12g0107800 |
Description | expressed protein |
Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 422126-425359 Nucleotide Length: 1377 |
Protein-coding | LOC_Os12g01710 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0016740 | transferase activity | Molecular Function | IEA | |
GO:0016740 | transferase activity | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005654 | nucleoplasm | Cellular Component | IEA | |
GO:0005654 | nucleoplasm | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os10g35290 LOC_Os03g44484 LOC_Os04g54840 LOC_Os03g28960 LOC_Os05g22830 LOC_Os08g07480 LOC_Os04g16820 LOC_Os05g22860 LOC_Os03g52400 LOC_Os05g49320 LOC_Os05g48050 More.. |
Downstream Genes | LOC_Os12g04510 LOC_Os12g33240 LOC_Os12g30490 LOC_Os12g42180 LOC_Os12g04160 LOC_Os12g38000 LOC_Os12g07010 |
Database Links | |
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Gramene | LOC_Os12g01710.1 |
Rice Genome Annotation | LOC_Os12g01710.1 |
Ricechip | LOC_Os12g01710.1 |