RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g01940.3 View Network Show in Genome Browser |
| Other Names | Os12g0110300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 559262-562829 Nucleotide Length: 771 |
| Protein-coding | LOC_Os12g01940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g44810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g01940.3 |
| Rice Genome Annotation | LOC_Os12g01940.3 |
| Ricechip | LOC_Os12g01940.3 |
| KEGG | osa:4351292 dosa:Os12t0110300-01 |
| Entrez-Gene | 4351292 |