RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g02530.1 View Network Show in Genome Browser |
| Other Names | Os12g0117400 |
| Description | BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 861131-863523 Nucleotide Length: 1713 |
| Protein-coding | LOC_Os12g02530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g02030 LOC_Os08g38700 LOC_Os07g15490 LOC_Os06g21330 LOC_Os01g56200 LOC_Os11g02070 LOC_Os06g31100 LOC_Os01g72020 LOC_Os05g33050 LOC_Os07g46160 LOC_Os07g01140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g02530.1 |
| Rice Genome Annotation | LOC_Os12g02530.1 |
| Ricechip | LOC_Os12g02530.1 |
| KEGG | osa:4351333 dosa:Os12t0117400-01 |
| Entrez-Gene | 4351333 |