RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g02589.1 View Network Show in Genome Browser |
| Other Names | Os12g0118400 |
| Description | hydrolase, alpha/beta fold family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 891782-898452 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os12g02589 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g02660 LOC_Os07g41230 LOC_Os07g42994 LOC_Os05g19150 LOC_Os04g55180 LOC_Os03g27110 LOC_Os01g69060 LOC_Os01g44960 LOC_Os09g34860 |
| Downstream Genes | LOC_Os12g43970 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2103 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g02589.1 |
| Rice Genome Annotation | LOC_Os12g02589.1 |
| Ricechip | LOC_Os12g02589.1 |
| KEGG | osa:4351341 dosa:Os12t0118400-02 |
| Entrez-Gene | 4351341 |