RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g02820.1 View Network Show in Genome Browser |
| Other Names | Os12g0121300 |
| Description | cytidylyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1005447-1011142 Nucleotide Length: 1275 |
| Protein-coding | LOC_Os12g02820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g08210 LOC_Os02g56980 LOC_Os05g44210 LOC_Os09g17870 LOC_Os10g42790 LOC_Os02g07720 LOC_Os09g34860 LOC_Os07g03690 LOC_Os02g54530 LOC_Os09g31380 LOC_Os08g06450 More.. |
| Downstream Genes | LOC_Os12g43700 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 rn00440 |
| Metacyc Pathways | PHOSLIPSYN2-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g02820.1 |
| Rice Genome Annotation | LOC_Os12g02820.1 |
| Ricechip | LOC_Os12g02820.1 |
| KEGG | osa:4351359 dosa:Os12t0121300-01 |
| Entrez-Gene | 4351359 |