RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g03090.1 View Network Show in Genome Browser |
| Other Names | Os12g0124200 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1169472-1170473 Nucleotide Length: 450 |
| Protein-coding | LOC_Os12g03090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18570 LOC_Os05g27940 LOC_Os03g18580 LOC_Os07g01870 LOC_Os03g54890 LOC_Os02g18380 LOC_Os09g08430 LOC_Os03g31090 LOC_Os04g42380 LOC_Os01g62350 LOC_Os05g38520 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os12g03880 LOC_Os12g21798 LOC_Os12g07010 LOC_Os12g05430 LOC_Os12g32380 LOC_Os12g07980 LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g17910 LOC_Os12g32240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g03090.1 |
| Rice Genome Annotation | LOC_Os12g03090.1 |
| Ricechip | LOC_Os12g03090.1 |
| KEGG | osa:4351374 dosa:Os12t0124200-01 |
| Entrez-Gene | 4351374 |