RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g03130.1 View Network Show in Genome Browser |
| Other Names | Os12g0124700 |
| Description | CDC45A - Putative DNA replication initiation protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1189043-1191517 Nucleotide Length: 1815 |
| Protein-coding | LOC_Os12g03130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67250 LOC_Os06g07210 LOC_Os05g39850 LOC_Os03g15810 LOC_Os09g24220 LOC_Os11g29380 LOC_Os02g55410 LOC_Os05g46270 LOC_Os05g06840 LOC_Os02g56130 LOC_Os02g56100 More.. |
| Downstream Genes | LOC_Os12g37400 LOC_Os12g13950 LOC_Os12g06200 LOC_Os12g30150 LOC_Os12g31810 LOC_Os12g07230 LOC_Os12g31370 LOC_Os12g03970 LOC_Os12g08280 LOC_Os12g38970 LOC_Os12g43100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g03130.1 |
| Rice Genome Annotation | LOC_Os12g03130.1 |
| Ricechip | LOC_Os12g03130.1 |
| KEGG | osa:4351377 dosa:Os12t0124700-01 |
| Entrez-Gene | 4351377 |