RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os12g03720.1 View Network Show in Genome Browser
Other Names	Os12g0131150,Os12g0131100
Description	glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed
Gene Attributes	Chromosome: Chr12 CDS Coordinates (5'-3'): 1500411-1505655 Nucleotide Length: 2043
Protein-coding	LOC_Os12g03720

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0030246	carbohydrate binding	Molecular Function	IEA
GO:0030246	carbohydrate binding	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os06g15420 LOC_Os01g48960 LOC_Os10g35290 LOC_Os02g11830 LOC_Os06g45120 LOC_Os10g22380 LOC_Os02g58020 LOC_Os08g12820 LOC_Os06g09290 LOC_Os02g54340 LOC_Os06g04280 More..
Downstream Genes	LOC_Os12g25710 LOC_Os12g19430 LOC_Os12g04030 LOC_Os12g03880 LOC_Os12g24080 LOC_Os12g37360 LOC_Os12g22630 LOC_Os12g07720 LOC_Os12g41400 LOC_Os12g20324 LOC_Os12g07740 More..

Pathways
Metacyc Pathways	UDPNACETYLGALSYN-PWY

Database Links
Gramene	LOC_Os12g03720.1
Rice Genome Annotation	LOC_Os12g03720.1
Ricechip	LOC_Os12g03720.1
KEGG	osa:4351413 dosa:Os12t0131150-00 dosa:Os12t0131100-01