RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g03822.1 View Network Show in Genome Browser |
| Other Names | Os12g0132400 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1562101-1566512 Nucleotide Length: 1398 |
| Protein-coding | LOC_Os12g03822 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g10434 LOC_Os07g08030 LOC_Os09g18320 LOC_Os02g37870 LOC_Os01g56620 LOC_Os03g52470 LOC_Os04g56670 LOC_Os03g06190 LOC_Os06g43690 LOC_Os01g43020 LOC_Os06g12990 More.. |
| Downstream Genes | LOC_Os12g36950 LOC_Os12g29660 LOC_Os12g07300 LOC_Os12g09280 LOC_Os12g04010 LOC_Os12g43830 LOC_Os12g25710 LOC_Os12g43100 LOC_Os12g42370 LOC_Os12g07010 LOC_Os12g06620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6247 |
| Reference | |
|---|---|
| PubMed | 16990291 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g03822.1 |
| Rice Genome Annotation | LOC_Os12g03822.1 |
| Ricechip | LOC_Os12g03822.1 |
| KEGG | osa:4351421 dosa:Os12t0132400-01 |
| Entrez-Gene | 4351421 |