RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g03950.1 View Network Show in Genome Browser |
| Other Names | Os12g0133300 |
| Description | major facilitator superfamily antiporter, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1635444-1642673 Nucleotide Length: 870 |
| Protein-coding | LOC_Os12g03950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g03940 LOC_Os11g04150 LOC_Os11g05390 LOC_Os05g50280 LOC_Os05g49270 LOC_Os05g49260 LOC_Os08g20570 LOC_Os01g65500 LOC_Os07g05640 LOC_Os07g37510 LOC_Os04g53930 More.. |
| Downstream Genes | LOC_Os12g25200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g03950.1 |
| Rice Genome Annotation | LOC_Os12g03950.1 |
| Ricechip | LOC_Os12g03950.1 |
| KEGG | osa:4351428 dosa:Os12t0133300-00 |
| Entrez-Gene | 4351428 |