RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g03960.1 View Network Show in Genome Browser |
| Other Names | Os12g0133400 |
| Description | dehydrogenase-phosphopantetheinyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1646375-1648104 Nucleotide Length: 852 |
| Protein-coding | LOC_Os12g03960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g04160 LOC_Os02g34680 LOC_Os02g56300 LOC_Os04g48410 LOC_Os10g11200 LOC_Os03g14800 LOC_Os02g54254 LOC_Os08g43130 LOC_Os06g39040 LOC_Os05g01550 LOC_Os06g02160 More.. |
| Downstream Genes | LOC_Os12g32180 LOC_Os12g39860 LOC_Os12g40130 LOC_Os12g13380 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g03960.1 |
| Rice Genome Annotation | LOC_Os12g03960.1 |
| Ricechip | LOC_Os12g03960.1 |
| KEGG | osa:4351429 dosa:Os12t0133400-01 |
| Entrez-Gene | 4351429 |