RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g04110.1 View Network Show in Genome Browser |
| Other Names | Os12g0135051,Os12g0135000 |
| Description | pentatricopeptide, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1719707-1726259 Nucleotide Length: 4788 |
| Protein-coding | LOC_Os12g04110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18310 LOC_Os05g07130 LOC_Os02g51590 LOC_Os06g11960 LOC_Os06g01950 LOC_Os04g01230 LOC_Os08g03682 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5534b |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g04110.1 |
| Rice Genome Annotation | LOC_Os12g04110.1 |
| Ricechip | LOC_Os12g04110.1 |
| KEGG | dosa:Os12t0135051-00dosa:Os12t0135000-01 |