RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g04500.1 View Network Show in Genome Browser |
| Other Names | Os12g0139400 |
| Description | response regulator receiver domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1915856-1917598 Nucleotide Length: 606 |
| Protein-coding | LOC_Os12g04500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53100 LOC_Os06g08450 LOC_Os06g44410 LOC_Os09g39400 LOC_Os08g44350 LOC_Os01g66360 LOC_Os02g06360 |
| Reference | |
|---|---|
| PubMed | 16919402 16472405 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g04500.1 |
| Rice Genome Annotation | LOC_Os12g04500.1 |
| Ricechip | LOC_Os12g04500.1 |
| KEGG | osa:4351462 dosa:Os12t0139400-01 |
| Entrez-Gene | 4351462 |