RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os12g04700.1 View Network Show in Genome Browser
Other Names	Os12g0141100
Description	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed
Gene Attributes	Chromosome: Chr12 CDS Coordinates (5'-3'): 1989584-1994270 Nucleotide Length: 2406
Protein-coding	LOC_Os12g04700

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009856	pollination	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g28140 LOC_Os03g63690 LOC_Os02g54910 LOC_Os01g27520 LOC_Os03g50320 LOC_Os08g34950 LOC_Os07g48780 LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 More..
Downstream Genes	LOC_Os12g40780 LOC_Os12g40770 LOC_Os12g37560 LOC_Os12g43940 LOC_Os12g43840 LOC_Os12g37590 LOC_Os12g30060

Pathways
KEGG Pathways	rn00562 rn01100

Database Links
Gramene	LOC_Os12g04700.1
Rice Genome Annotation	LOC_Os12g04700.1
Ricechip	LOC_Os12g04700.1
KEGG	osa:4351470 dosa:Os12t0141100-01
Entrez-Gene	4351470