RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g05080.1 View Network Show in Genome Browser |
| Other Names | Os12g0145400 |
| Description | PMR5, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 2231249-2234906 Nucleotide Length: 1359 |
| Protein-coding | LOC_Os12g05080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g02350 LOC_Os07g15670 LOC_Os01g48270 LOC_Os01g68450 LOC_Os01g21990 LOC_Os03g03670 LOC_Os09g31970 LOC_Os08g40180 LOC_Os10g35180 LOC_Os03g17660 LOC_Os02g17380 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5537 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g05080.1 |
| Rice Genome Annotation | LOC_Os12g05080.1 |
| Ricechip | LOC_Os12g05080.1 |
| KEGG | osa:4351490 dosa:Os12t0145400-01 |
| Entrez-Gene | 4351490 |