RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g05430.1 View Network Show in Genome Browser |
| Other Names | Os12g0150100 |
| Description | ribosomal protein L24, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 2460536-2461358 Nucleotide Length: 453 |
| Protein-coding | LOC_Os12g05430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48310 LOC_Os05g48220 LOC_Os02g18380 LOC_Os05g38520 LOC_Os01g62350 LOC_Os10g41470 LOC_Os09g08430 LOC_Os04g50990 LOC_Os02g47140 LOC_Os03g21940 LOC_Os08g03640 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os12g21798 LOC_Os12g07010 LOC_Os12g32380 LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g33080 LOC_Os12g32240 LOC_Os12g25710 LOC_Os12g42180 LOC_Os12g17910 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g05430.1 |
| Rice Genome Annotation | LOC_Os12g05430.1 |
| Ricechip | LOC_Os12g05430.1 |
| KEGG | osa:4351513 dosa:Os12t0150100-01 |
| Entrez-Gene | 4351513 |