RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g06910.1 View Network Show in Genome Browser |
| Other Names | Os12g0166500 |
| Description | nucleolar protein family 6, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3360716-3369213 Nucleotide Length: 3111 |
| Protein-coding | LOC_Os12g06910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08360 LOC_Os07g10350 LOC_Os02g57590 LOC_Os08g02410 LOC_Os04g46310 LOC_Os01g08770 LOC_Os08g02400 LOC_Os05g44320 LOC_Os03g22880 LOC_Os02g50370 LOC_Os02g54110 More.. |
| Downstream Genes | LOC_Os12g07300 LOC_Os12g07010 LOC_Os12g43600 LOC_Os12g21798 LOC_Os12g31800 LOC_Os12g30150 LOC_Os12g38000 LOC_Os12g07230 LOC_Os12g29660 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g06910.1 |
| Rice Genome Annotation | LOC_Os12g06910.1 |
| Ricechip | LOC_Os12g06910.1 |
| KEGG | osa:4351600 dosa:Os12t0166500-01 |
| Entrez-Gene | 4351600 |