RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os12g07010.1 View Network Show in Genome Browser |
Other Names | Os12g0167900 |
Description | ribosomal protein L3, putative, expressed |
Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3429220-3431784 Nucleotide Length: 1170 |
Protein-coding | LOC_Os12g07010 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009790 | embryo development | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0000003 | reproduction | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g67134 LOC_Os03g38000 LOC_Os03g58430 LOC_Os03g40180 LOC_Os07g08660 LOC_Os07g41750 LOC_Os05g19370 LOC_Os03g59310 LOC_Os02g14059 LOC_Os06g35730 LOC_Os05g11710 More.. |
Downstream Genes | LOC_Os12g38000 LOC_Os12g33240 LOC_Os12g30490 LOC_Os12g21798 LOC_Os12g42180 LOC_Os12g29660 LOC_Os12g32380 LOC_Os12g42370 LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g17910 More.. |
Database Links | |
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Gramene | LOC_Os12g07010.1 |
Rice Genome Annotation | LOC_Os12g07010.1 |
Ricechip | LOC_Os12g07010.1 |
KEGG | osa:4351604 dosa:Os12t0167900-01 |
Entrez-Gene | 4351604 |