RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07020.1 View Network Show in Genome Browser |
| Other Names | Os12g0168000 |
| Description | 5-formyltetrahydrofolate cyclo-ligase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3431908-3437224 Nucleotide Length: 1053 |
| Protein-coding | LOC_Os12g07020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63950 LOC_Os07g39070 LOC_Os02g22260 LOC_Os03g46250 LOC_Os03g39830 LOC_Os03g46200 LOC_Os03g58010 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3841 PWY-2201 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07020.1 |
| Rice Genome Annotation | LOC_Os12g07020.1 |
| Ricechip | LOC_Os12g07020.1 |
| KEGG | osa:4351605 dosa:Os12t0168000-01 |
| Entrez-Gene | 4351605 |