RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07110.2 View Network Show in Genome Browser |
| Other Names | Os12g0168700 |
| Description | acyl-CoA synthetase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3483918-3489371 Nucleotide Length: 2097 |
| Protein-coding | LOC_Os12g07110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g37210 LOC_Os01g11300 LOC_Os02g32490 LOC_Os02g01920 LOC_Os03g12900 LOC_Os01g11340 LOC_Os01g51170 LOC_Os01g11270 LOC_Os03g12910 LOC_Os12g04990 LOC_Os01g11280 More.. |
| Downstream Genes | LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g18860 LOC_Os12g22630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR437 osa-miR1871 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07110.2 |
| Rice Genome Annotation | LOC_Os12g07110.2 |
| Ricechip | LOC_Os12g07110.2 |
| KEGG | osa:4351610 dosa:Os12t0168700-01 |
| Entrez-Gene | 4351610 |