RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07290.1 View Network Show in Genome Browser |
| Other Names | Os12g0170600 |
| Description | alpha-1,4-fucosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3583428-3587386 Nucleotide Length: 1272 |
| Protein-coding | LOC_Os12g07290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g45180 LOC_Os02g07160 LOC_Os01g21380 LOC_Os01g59340 LOC_Os04g24530 LOC_Os07g25590 LOC_Os03g56800 LOC_Os02g13140 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07290.1 |
| Rice Genome Annotation | LOC_Os12g07290.1 |
| Ricechip | LOC_Os12g07290.1 |
| KEGG | osa:4351626 dosa:Os12t0170600-01 |
| Entrez-Gene | 4351626 |