RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07700.1 View Network Show in Genome Browser |
| Other Names | Os12g0176200 |
| Description | nifU, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3867728-3869856 Nucleotide Length: 681 |
| Protein-coding | LOC_Os12g07700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54020 LOC_Os08g05490 LOC_Os05g51750 LOC_Os06g03390 LOC_Os12g05650 LOC_Os03g14370 LOC_Os03g51990 LOC_Os08g42100 LOC_Os07g17310 LOC_Os03g29980 LOC_Os03g40100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07700.1 |
| Rice Genome Annotation | LOC_Os12g07700.1 |
| Ricechip | LOC_Os12g07700.1 |
| KEGG | osa:4351651 dosa:Os12t0176200-01 |
| Entrez-Gene | 4351651 |