RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07810.1 View Network Show in Genome Browser |
| Other Names | Os12g0178000,Os12g0177900 |
| Description | aldehyde dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3947120-3955922 Nucleotide Length: 1455 |
| Protein-coding | LOC_Os12g07810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05660 LOC_Os02g07760 LOC_Os07g29620 LOC_Os02g52860 LOC_Os05g46230 LOC_Os05g38150 LOC_Os01g40280 LOC_Os02g10070 LOC_Os09g38030 LOC_Os06g03780 LOC_Os11g33240 More.. |
| Downstream Genes | LOC_Os12g10580 LOC_Os12g34550 LOC_Os12g43740 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn00410 rn00260 rn00625 rn01100 rn01120 rn00071 rn00640 rn00010 rn00620 rn01110 rn00561 rn00280 rn00340 rn00040 rn00053 rn00380 rn00310 rn00903 |
| Metacyc Pathways | CHOLINE-BETAINE-ANA-PWY BETSYN-PWY PWY-3722 PWY1F-353 PWY-3162 PWY-3641 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07810.1 |
| Rice Genome Annotation | LOC_Os12g07810.1 |
| Ricechip | LOC_Os12g07810.1 |
| KEGG | osa:9271186 dosa:Os12t0178000-01dosa:Os12t0177900-00 |