RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g08260.6 View Network Show in Genome Browser |
| Other Names | Os12g0183250,Os12g0183100 |
| Description | dehydrogenase E1 component domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4209174-4213475 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os12g08260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g07470 LOC_Os01g21160 LOC_Os03g51600 LOC_Os09g28050 LOC_Os11g14220 LOC_Os01g22520 LOC_Os09g07820 LOC_Os05g06750 LOC_Os05g31780 LOC_Os05g48450 LOC_Os11g26850 More.. |
| Downstream Genes | LOC_Os12g43630 LOC_Os12g13380 LOC_Os12g42230 LOC_Os12g32240 LOC_Os12g41250 LOC_Os12g13390 LOC_Os12g38000 LOC_Os12g21798 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g08260.6 |
| Rice Genome Annotation | LOC_Os12g08260.6 |
| Ricechip | LOC_Os12g08260.6 |
| KEGG | osa:4351684 dosa:Os12t0183100-01 |