RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g08280.1 View Network Show in Genome Browser |
| Other Names | Os12g0183300 |
| Description | inositol-1-monophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4216563-4219484 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os12g08280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39000 LOC_Os02g30840 LOC_Os09g16910 LOC_Os08g06600 LOC_Os03g38010 LOC_Os07g32570 LOC_Os03g40400 LOC_Os11g26910 LOC_Os03g37984 LOC_Os12g07950 LOC_Os05g49300 More.. |
| Downstream Genes | LOC_Os12g27070 LOC_Os12g30030 LOC_Os12g39080 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn01120 rn00920 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g08280.1 |
| Rice Genome Annotation | LOC_Os12g08280.1 |
| Ricechip | LOC_Os12g08280.1 |
| KEGG | osa:4351686 dosa:Os12t0183300-01 |
| Entrez-Gene | 4351686 |