RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g08810.1 View Network Show in Genome Browser |
| Other Names | Os12g0190000 |
| Description | VTC2, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 4532922-4537231 Nucleotide Length: 1317 |
| Protein-coding | LOC_Os12g08810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63210 LOC_Os11g12340 LOC_Os02g58260 LOC_Os11g11000 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00053 rn01100 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g08810.1 |
| Rice Genome Annotation | LOC_Os12g08810.1 |
| Ricechip | LOC_Os12g08810.1 |
| KEGG | osa:4351698 dosa:Os12t0190000-01 |
| Entrez-Gene | 4351698 |